Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NrlP54846 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NrlP54846 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NrlP54846 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NrlP54846 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
NrlP54846 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NrlP54846 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.03■□□□□ 0.96
NrlP54846 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.03■□□□□ 0.96
NrlP54846 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NrlP54846 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NrlP54846 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NrlP54846 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NrlP54846 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NrlP54846 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NrlP54846 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.02■□□□□ 0.96
NrlP54846 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NrlP54846 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NrlP54846 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.95
NrlP54846 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NrlP54846 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.01■□□□□ 0.95
NrlP54846 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.01■□□□□ 0.95
NrlP54846 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.01■□□□□ 0.95
NrlP54846 Gm9988-201ENSMUST00000069786 435 ntBASIC21.01■□□□□ 0.95
NrlP54846 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NrlP54846 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21■□□□□ 0.95
NrlP54846 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NrlP54846 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NrlP54846 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NrlP54846 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21■□□□□ 0.95
NrlP54846 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NrlP54846 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21■□□□□ 0.95
NrlP54846 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Gm27011-201ENSMUST00000182352 972 ntBASIC20.99■□□□□ 0.95
NrlP54846 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NrlP54846 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.98■□□□□ 0.95
NrlP54846 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.98■□□□□ 0.95
NrlP54846 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.98■□□□□ 0.95
NrlP54846 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.98■□□□□ 0.95
NrlP54846 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.98■□□□□ 0.95
NrlP54846 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.98■□□□□ 0.95
NrlP54846 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NrlP54846 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NrlP54846 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NrlP54846 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.97■□□□□ 0.95
NrlP54846 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.97■□□□□ 0.95
NrlP54846 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NrlP54846 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NrlP54846 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NrlP54846 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NrlP54846 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NrlP54846 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NrlP54846 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NrlP54846 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NrlP54846 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NrlP54846 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.96■□□□□ 0.95
NrlP54846 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.96■□□□□ 0.95
NrlP54846 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.96■□□□□ 0.95
NrlP54846 Gm10602-201ENSMUST00000098239 609 ntBASIC20.96■□□□□ 0.95
NrlP54846 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NrlP54846 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.95■□□□□ 0.94
NrlP54846 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NrlP54846 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.95■□□□□ 0.94
NrlP54846 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NrlP54846 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms