Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxd8P23463 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hoxd8P23463 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.6■□□□□ 0.89
Hoxd8P23463 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxd8P23463 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxd8P23463 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hoxd8P23463 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxd8P23463 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Gm13146-201ENSMUST00000118508 780 ntBASIC20.59■□□□□ 0.89
Hoxd8P23463 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.59■□□□□ 0.89
Hoxd8P23463 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxd8P23463 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Hoxd8P23463 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.58■□□□□ 0.89
Hoxd8P23463 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.58■□□□□ 0.89
Hoxd8P23463 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxd8P23463 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.57■□□□□ 0.88
Hoxd8P23463 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hoxd8P23463 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hoxd8P23463 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.57■□□□□ 0.88
Hoxd8P23463 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.57■□□□□ 0.88
Hoxd8P23463 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxd8P23463 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
Hoxd8P23463 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Gm7514-201ENSMUST00000209475 934 ntBASIC20.56■□□□□ 0.88
Hoxd8P23463 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxd8P23463 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.55■□□□□ 0.88
Hoxd8P23463 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxd8P23463 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxd8P23463 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hoxd8P23463 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.55■□□□□ 0.88
Hoxd8P23463 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.55■□□□□ 0.88
Hoxd8P23463 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxd8P23463 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxd8P23463 AA386476-201ENSMUST00000098781 1665 ntBASIC20.54■□□□□ 0.88
Hoxd8P23463 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Hoxd8P23463 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.53■□□□□ 0.88
Hoxd8P23463 Gm22325-201ENSMUST00000158904 308 ntBASIC20.53■□□□□ 0.88
Hoxd8P23463 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxd8P23463 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxd8P23463 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.52■□□□□ 0.88
Hoxd8P23463 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxd8P23463 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxd8P23463 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxd8P23463 Gm10602-201ENSMUST00000098239 609 ntBASIC20.52■□□□□ 0.88
Hoxd8P23463 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxd8P23463 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Hoxd8P23463 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Hoxd8P23463 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.51■□□□□ 0.87
Hoxd8P23463 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxd8P23463 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.51■□□□□ 0.87
Hoxd8P23463 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Hoxd8P23463 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxd8P23463 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.51■□□□□ 0.87
Hoxd8P23463 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.51■□□□□ 0.87
Hoxd8P23463 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxd8P23463 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.51■□□□□ 0.87
Hoxd8P23463 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxd8P23463 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxd8P23463 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxd8P23463 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms