Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P03980 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Gm10399-202ENSMUST00000202768 748 ntBASIC15.22■□□□□ 0.03
P03980 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P03980 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
P03980 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P03980 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P03980 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P03980 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.21■□□□□ 0.03
P03980 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.21■□□□□ 0.03
P03980 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P03980 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.21■□□□□ 0.03
P03980 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P03980 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P03980 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P03980 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P03980 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P03980 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
P03980 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.2■□□□□ 0.02
P03980 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
P03980 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.2■□□□□ 0.02
P03980 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
P03980 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P03980 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.2■□□□□ 0.02
P03980 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P03980 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P03980 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.19■□□□□ 0.02
P03980 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.19■□□□□ 0.02
P03980 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P03980 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P03980 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P03980 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.18■□□□□ 0.02
P03980 Gm7143-201ENSMUST00000222811 859 ntBASIC15.18■□□□□ 0.02
P03980 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
P03980 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.18■□□□□ 0.02
P03980 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P03980 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P03980 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.17■□□□□ 0.02
P03980 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.17■□□□□ 0.02
P03980 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.17■□□□□ 0.02
P03980 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P03980 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
P03980 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Gm13238-201ENSMUST00000117655 780 ntBASIC15.16■□□□□ 0.02
P03980 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.16■□□□□ 0.02
P03980 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.16■□□□□ 0.02
P03980 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P03980 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P03980 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
P03980 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.15■□□□□ 0.02
P03980 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P03980 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P03980 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms