Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp2O88623 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp2O88623 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp2O88623 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Gm5874-201ENSMUST00000096101 508 ntBASIC20.16■□□□□ 0.82
Usp2O88623 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp2O88623 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Usp2O88623 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Usp2O88623 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp2O88623 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp2O88623 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp2O88623 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.15■□□□□ 0.82
Usp2O88623 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp2O88623 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp2O88623 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp2O88623 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp2O88623 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp2O88623 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Usp2O88623 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp2O88623 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp2O88623 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp2O88623 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Usp2O88623 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp2O88623 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp2O88623 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp2O88623 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.14■□□□□ 0.81
Usp2O88623 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.13■□□□□ 0.81
Usp2O88623 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp2O88623 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp2O88623 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Usp2O88623 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Usp2O88623 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp2O88623 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp2O88623 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.11■□□□□ 0.81
Usp2O88623 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp2O88623 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp2O88623 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp2O88623 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp2O88623 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Usp2O88623 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.11■□□□□ 0.81
Usp2O88623 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp2O88623 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp2O88623 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.1■□□□□ 0.81
Usp2O88623 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp2O88623 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.1■□□□□ 0.81
Usp2O88623 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp2O88623 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp2O88623 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp2O88623 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp2O88623 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp2O88623 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Usp2O88623 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.09■□□□□ 0.81
Usp2O88623 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp2O88623 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Gm10493-201ENSMUST00000097270 612 ntBASIC20.09■□□□□ 0.81
Usp2O88623 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp2O88623 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp2O88623 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp2O88623 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp2O88623 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms