Protein–RNA interactions for Protein: A0A0N4SWI3

D6Ertd527e, DNA segment, Chr 6, ERATO Doi 527,-expressed, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
D6Ertd527eA0A0N4SWI3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
D6Ertd527eA0A0N4SWI3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm20760-201ENSMUST00000179197 648 ntBASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm32051-202ENSMUST00000197905 2385 ntBASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm10653-202ENSMUST00000139570 835 ntBASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Gm4968-201ENSMUST00000071458 858 ntBASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
D6Ertd527eA0A0N4SWI3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms