Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Trbv30A0A0B4J1P1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv30A0A0B4J1P1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trbv30A0A0B4J1P1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv30A0A0B4J1P1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv30A0A0B4J1P1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv30A0A0B4J1P1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv30A0A0B4J1P1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm27454-201ENSMUST00000185090 204 ntBASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv30A0A0B4J1P1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.77□□□□□ -0.04
Trbv30A0A0B4J1P1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv30A0A0B4J1P1 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.77□□□□□ -0.04
Trbv30A0A0B4J1P1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv30A0A0B4J1P1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms