Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.33■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Igkv5-45A0A0B4J1J1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.31■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-45A0A0B4J1J1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms