Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm10420-201ENSMUST00000121713 882 ntBASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv12-2A0A0B4J1H1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-2A0A0B4J1H1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms