Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.49■□□□□ 0.87
Trim60Q8VI40 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim60Q8VI40 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim60Q8VI40 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim60Q8VI40 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Trim60Q8VI40 Gm43530-201ENSMUST00000195920 274 ntBASIC20.47■□□□□ 0.87
Trim60Q8VI40 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim60Q8VI40 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim60Q8VI40 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trim60Q8VI40 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim60Q8VI40 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Gm9870-201ENSMUST00000063874 645 ntBASIC20.45■□□□□ 0.86
Trim60Q8VI40 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim60Q8VI40 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.44■□□□□ 0.86
Trim60Q8VI40 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim60Q8VI40 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.43■□□□□ 0.86
Trim60Q8VI40 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.43■□□□□ 0.86
Trim60Q8VI40 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim60Q8VI40 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim60Q8VI40 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim60Q8VI40 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim60Q8VI40 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim60Q8VI40 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim60Q8VI40 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim60Q8VI40 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.4■□□□□ 0.86
Trim60Q8VI40 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim60Q8VI40 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim60Q8VI40 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim60Q8VI40 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.39■□□□□ 0.85
Trim60Q8VI40 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim60Q8VI40 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim60Q8VI40 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Trim60Q8VI40 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim60Q8VI40 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim60Q8VI40 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms