Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upb1Q8VC97 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upb1Q8VC97 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upb1Q8VC97 Gm8495-201ENSMUST00000188740 694 ntBASIC21.6■■□□□ 1.05
Upb1Q8VC97 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.6■■□□□ 1.05
Upb1Q8VC97 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.6■■□□□ 1.05
Upb1Q8VC97 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.6■■□□□ 1.05
Upb1Q8VC97 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upb1Q8VC97 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.59■■□□□ 1.05
Upb1Q8VC97 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.59■■□□□ 1.05
Upb1Q8VC97 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upb1Q8VC97 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Upb1Q8VC97 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Upb1Q8VC97 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.58■■□□□ 1.05
Upb1Q8VC97 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Upb1Q8VC97 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upb1Q8VC97 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upb1Q8VC97 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upb1Q8VC97 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upb1Q8VC97 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upb1Q8VC97 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upb1Q8VC97 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Upb1Q8VC97 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Upb1Q8VC97 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.56■■□□□ 1.04
Upb1Q8VC97 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Upb1Q8VC97 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.55■■□□□ 1.04
Upb1Q8VC97 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Upb1Q8VC97 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upb1Q8VC97 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Upb1Q8VC97 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Upb1Q8VC97 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.53■■□□□ 1.04
Upb1Q8VC97 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Upb1Q8VC97 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Upb1Q8VC97 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Upb1Q8VC97 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Upb1Q8VC97 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Gm5874-201ENSMUST00000096101 508 ntBASIC21.52■■□□□ 1.04
Upb1Q8VC97 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Upb1Q8VC97 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Upb1Q8VC97 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.51■■□□□ 1.03
Upb1Q8VC97 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upb1Q8VC97 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upb1Q8VC97 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms