Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 CT025689.6-201ENSMUST00000224991 1104 ntBASIC28.51■■■□□ 2.15
Cd109Q8R422 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Cd109Q8R422 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cd109Q8R422 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cd109Q8R422 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cd109Q8R422 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Cd109Q8R422 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cd109Q8R422 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cd109Q8R422 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cd109Q8R422 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Ap3s1-204ENSMUST00000225520 957 ntBASIC28.48■■■□□ 2.15
Cd109Q8R422 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cd109Q8R422 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cd109Q8R422 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
Cd109Q8R422 Gm27011-201ENSMUST00000182352 972 ntBASIC28.47■■■□□ 2.15
Cd109Q8R422 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Cd109Q8R422 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cd109Q8R422 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cd109Q8R422 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cd109Q8R422 CT030146.1-201ENSMUST00000220919 217 ntBASIC28.46■■■□□ 2.15
Cd109Q8R422 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cd109Q8R422 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Cd109Q8R422 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Cd109Q8R422 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cd109Q8R422 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Cd109Q8R422 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cd109Q8R422 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cd109Q8R422 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cd109Q8R422 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cd109Q8R422 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cd109Q8R422 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC28.44■■■□□ 2.14
Cd109Q8R422 Spcs1-207ENSMUST00000228767 1008 ntBASIC28.44■■■□□ 2.14
Cd109Q8R422 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cd109Q8R422 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
Cd109Q8R422 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC28.43■■■□□ 2.14
Cd109Q8R422 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cd109Q8R422 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cd109Q8R422 Gm12504-201ENSMUST00000120860 2231 ntBASIC28.43■■■□□ 2.14
Cd109Q8R422 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cd109Q8R422 Gm12933-201ENSMUST00000120203 872 ntBASIC28.43■■■□□ 2.14
Cd109Q8R422 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cd109Q8R422 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cd109Q8R422 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cd109Q8R422 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
Cd109Q8R422 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cd109Q8R422 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC28.4■■■□□ 2.14
Cd109Q8R422 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cd109Q8R422 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC28.4■■■□□ 2.14
Cd109Q8R422 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cd109Q8R422 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cd109Q8R422 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cd109Q8R422 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Cd109Q8R422 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cd109Q8R422 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.13
Cd109Q8R422 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
Cd109Q8R422 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cd109Q8R422 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cd109Q8R422 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Cd109Q8R422 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cd109Q8R422 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Cd109Q8R422 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cd109Q8R422 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cd109Q8R422 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC28.38■■■□□ 2.13
Cd109Q8R422 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Cd109Q8R422 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC28.37■■■□□ 2.13
Cd109Q8R422 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cd109Q8R422 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cd109Q8R422 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cd109Q8R422 Gm17641-201ENSMUST00000166328 2350 ntBASIC28.36■■■□□ 2.13
Cd109Q8R422 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cd109Q8R422 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cd109Q8R422 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cd109Q8R422 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cd109Q8R422 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Cd109Q8R422 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cd109Q8R422 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cd109Q8R422 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
Cd109Q8R422 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Gm42911-201ENSMUST00000199360 1630 ntBASIC28.34■■■□□ 2.13
Cd109Q8R422 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms