Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf4Q8K4J2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf4Q8K4J2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.04■□□□□ 0.48
Ebf4Q8K4J2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf4Q8K4J2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ebf4Q8K4J2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.02■□□□□ 0.47
Ebf4Q8K4J2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf4Q8K4J2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ebf4Q8K4J2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf4Q8K4J2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms