Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp28Q8CGV8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Mmp28Q8CGV8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mmp28Q8CGV8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Mmp28Q8CGV8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mmp28Q8CGV8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mmp28Q8CGV8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Gm10420-201ENSMUST00000121713 882 ntBASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp28Q8CGV8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp28Q8CGV8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp28Q8CGV8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Cap2-205ENSMUST00000225824 1634 ntBASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms