Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8CDN1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Q8CDN1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Q8CDN1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Q8CDN1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Q8CDN1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Q8CDN1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8CDN1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.49■□□□□ 0.87
Q8CDN1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8CDN1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8CDN1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Q8CDN1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8CDN1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8CDN1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Q8CDN1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.48■□□□□ 0.87
Q8CDN1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.48■□□□□ 0.87
Q8CDN1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.48■□□□□ 0.87
Q8CDN1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8CDN1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.48■□□□□ 0.87
Q8CDN1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8CDN1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.48■□□□□ 0.87
Q8CDN1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.48■□□□□ 0.87
Q8CDN1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Q8CDN1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Q8CDN1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q8CDN1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q8CDN1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.47■□□□□ 0.87
Q8CDN1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.47■□□□□ 0.87
Q8CDN1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Q8CDN1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q8CDN1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q8CDN1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q8CDN1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Q8CDN1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Q8CDN1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Q8CDN1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.46■□□□□ 0.87
Q8CDN1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q8CDN1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Q8CDN1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Q8CDN1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Q8CDN1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8CDN1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8CDN1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.45■□□□□ 0.86
Q8CDN1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8CDN1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8CDN1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Q8CDN1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Q8CDN1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.45■□□□□ 0.86
Q8CDN1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Q8CDN1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.44■□□□□ 0.86
Q8CDN1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.44■□□□□ 0.86
Q8CDN1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.44■□□□□ 0.86
Q8CDN1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.44■□□□□ 0.86
Q8CDN1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Q8CDN1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8CDN1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Q8CDN1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8CDN1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.42■□□□□ 0.86
Q8CDN1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8CDN1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.41■□□□□ 0.86
Q8CDN1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.41■□□□□ 0.86
Q8CDN1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.41■□□□□ 0.86
Q8CDN1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Q8CDN1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8CDN1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 149.7 ms