Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Lrif1Q8CDD9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrif1Q8CDD9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrif1Q8CDD9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lrif1Q8CDD9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lrif1Q8CDD9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lrif1Q8CDD9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lrif1Q8CDD9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lrif1Q8CDD9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Etf1-202ENSMUST00000180351 108 ntBASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrif1Q8CDD9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrif1Q8CDD9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrif1Q8CDD9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrif1Q8CDD9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lrif1Q8CDD9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrif1Q8CDD9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms