Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln3Q8C5U9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln3Q8C5U9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Golgb1-201ENSMUST00000023534 498 ntBASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln3Q8C5U9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubqln3Q8C5U9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.27■□□□□ 0.36
Ubqln3Q8C5U9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubqln3Q8C5U9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ubqln3Q8C5U9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ubqln3Q8C5U9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubqln3Q8C5U9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubqln3Q8C5U9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubqln3Q8C5U9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubqln3Q8C5U9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms