Protein–RNA interactions for Protein: Q80VL1

Tdrkh, Tudor and KH domain-containing protein, mousemouse

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TdrkhQ80VL1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TdrkhQ80VL1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TdrkhQ80VL1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TdrkhQ80VL1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TdrkhQ80VL1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TdrkhQ80VL1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TdrkhQ80VL1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TdrkhQ80VL1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Gm12821-201ENSMUST00000120022 600 ntBASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TdrkhQ80VL1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TdrkhQ80VL1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.33■□□□□ 0.84
TdrkhQ80VL1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TdrkhQ80VL1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Mir6236-201ENSMUST00000184437 123 ntBASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TdrkhQ80VL1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Gm43137-201ENSMUST00000198052 594 ntBASIC20.3■□□□□ 0.84
TdrkhQ80VL1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TdrkhQ80VL1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Gm27454-201ENSMUST00000185090 204 ntBASIC20.29■□□□□ 0.84
TdrkhQ80VL1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TdrkhQ80VL1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TdrkhQ80VL1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.27■□□□□ 0.84
TdrkhQ80VL1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TdrkhQ80VL1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TdrkhQ80VL1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TdrkhQ80VL1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TdrkhQ80VL1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms