Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Kdm3aQ6PCM1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Kdm3aQ6PCM1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.05■■□□□ 1.44
Kdm3aQ6PCM1 Gm8495-201ENSMUST00000188740 694 ntBASIC24.05■■□□□ 1.44
Kdm3aQ6PCM1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Kdm3aQ6PCM1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Kdm3aQ6PCM1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kdm3aQ6PCM1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kdm3aQ6PCM1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.04■■□□□ 1.44
Kdm3aQ6PCM1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kdm3aQ6PCM1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kdm3aQ6PCM1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Kdm3aQ6PCM1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kdm3aQ6PCM1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Kdm3aQ6PCM1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Kdm3aQ6PCM1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Kdm3aQ6PCM1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Kdm3aQ6PCM1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Gm10493-201ENSMUST00000097270 612 ntBASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Kdm3aQ6PCM1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Kdm3aQ6PCM1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Kdm3aQ6PCM1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
Kdm3aQ6PCM1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Gm5874-201ENSMUST00000096101 508 ntBASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
Kdm3aQ6PCM1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kdm3aQ6PCM1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.94■■□□□ 1.42
Kdm3aQ6PCM1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kdm3aQ6PCM1 Gm27801-201ENSMUST00000184174 223 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms