Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VcanQ62059 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VcanQ62059 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VcanQ62059 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.95■□□□□ 0.62
VcanQ62059 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.95■□□□□ 0.62
VcanQ62059 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.95■□□□□ 0.62
VcanQ62059 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.95■□□□□ 0.62
VcanQ62059 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VcanQ62059 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VcanQ62059 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.94■□□□□ 0.62
VcanQ62059 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VcanQ62059 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VcanQ62059 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VcanQ62059 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VcanQ62059 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.94■□□□□ 0.62
VcanQ62059 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VcanQ62059 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VcanQ62059 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
VcanQ62059 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VcanQ62059 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
VcanQ62059 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VcanQ62059 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.93■□□□□ 0.62
VcanQ62059 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VcanQ62059 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VcanQ62059 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VcanQ62059 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.93■□□□□ 0.62
VcanQ62059 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VcanQ62059 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VcanQ62059 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
VcanQ62059 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
VcanQ62059 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VcanQ62059 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.92■□□□□ 0.62
VcanQ62059 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VcanQ62059 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VcanQ62059 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.92■□□□□ 0.62
VcanQ62059 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VcanQ62059 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.91■□□□□ 0.62
VcanQ62059 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VcanQ62059 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VcanQ62059 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VcanQ62059 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VcanQ62059 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.91■□□□□ 0.62
VcanQ62059 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.91■□□□□ 0.62
VcanQ62059 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.91■□□□□ 0.62
VcanQ62059 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VcanQ62059 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VcanQ62059 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.9■□□□□ 0.62
VcanQ62059 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VcanQ62059 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.9■□□□□ 0.62
VcanQ62059 Gm26524-201ENSMUST00000192339 390 ntBASIC18.9■□□□□ 0.62
VcanQ62059 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.9■□□□□ 0.62
VcanQ62059 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VcanQ62059 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VcanQ62059 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
VcanQ62059 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
VcanQ62059 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VcanQ62059 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VcanQ62059 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VcanQ62059 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VcanQ62059 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VcanQ62059 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.88■□□□□ 0.61
VcanQ62059 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VcanQ62059 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VcanQ62059 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VcanQ62059 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VcanQ62059 Gm11643-201ENSMUST00000119578 864 ntBASIC18.87■□□□□ 0.61
VcanQ62059 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.87■□□□□ 0.61
VcanQ62059 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VcanQ62059 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VcanQ62059 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.87■□□□□ 0.61
VcanQ62059 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VcanQ62059 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Gm27275-201ENSMUST00000184318 272 ntBASIC18.86■□□□□ 0.61
VcanQ62059 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.86■□□□□ 0.61
VcanQ62059 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
VcanQ62059 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms