Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn6Q03958 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.83■□□□□ 0.77
Pfdn6Q03958 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.83■□□□□ 0.77
Pfdn6Q03958 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.83■□□□□ 0.77
Pfdn6Q03958 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pfdn6Q03958 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.83■□□□□ 0.77
Pfdn6Q03958 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pfdn6Q03958 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn6Q03958 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
Pfdn6Q03958 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn6Q03958 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pfdn6Q03958 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.79■□□□□ 0.76
Pfdn6Q03958 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn6Q03958 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.78■□□□□ 0.76
Pfdn6Q03958 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn6Q03958 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Iqck-206ENSMUST00000208658 2891 ntBASIC19.77■□□□□ 0.76
Pfdn6Q03958 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn6Q03958 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.77■□□□□ 0.75
Pfdn6Q03958 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms