Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a3P56564 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Slc1a3P56564 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.75■□□□□ 0.43
Slc1a3P56564 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc1a3P56564 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a3P56564 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.74■□□□□ 0.43
Slc1a3P56564 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Slc1a3P56564 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a3P56564 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Slc1a3P56564 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Slc1a3P56564 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc1a3P56564 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Slc1a3P56564 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a3P56564 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a3P56564 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc1a3P56564 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc1a3P56564 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.72■□□□□ 0.43
Slc1a3P56564 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc1a3P56564 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc1a3P56564 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc1a3P56564 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.71■□□□□ 0.43
Slc1a3P56564 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc1a3P56564 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a3P56564 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a3P56564 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a3P56564 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.7■□□□□ 0.42
Slc1a3P56564 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc1a3P56564 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a3P56564 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Gm45444-201ENSMUST00000211394 898 ntBASIC17.69■□□□□ 0.42
Slc1a3P56564 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.69■□□□□ 0.42
Slc1a3P56564 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc1a3P56564 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc1a3P56564 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a3P56564 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a3P56564 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc1a3P56564 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a3P56564 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc1a3P56564 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a3P56564 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a3P56564 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a3P56564 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc1a3P56564 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.67■□□□□ 0.42
Slc1a3P56564 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a3P56564 Golph3-205ENSMUST00000228671 2842 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms