Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fen1P39749 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fen1P39749 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Fen1P39749 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Fen1P39749 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fen1P39749 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fen1P39749 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Fen1P39749 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.82■□□□□ 0.76
Fen1P39749 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.82■□□□□ 0.76
Fen1P39749 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fen1P39749 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.81■□□□□ 0.76
Fen1P39749 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.81■□□□□ 0.76
Fen1P39749 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Fen1P39749 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Fen1P39749 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fen1P39749 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Fen1P39749 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fen1P39749 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fen1P39749 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Fen1P39749 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fen1P39749 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.8■□□□□ 0.76
Fen1P39749 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.8■□□□□ 0.76
Fen1P39749 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Fen1P39749 Gm5812-201ENSMUST00000061073 957 ntBASIC19.8■□□□□ 0.76
Fen1P39749 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fen1P39749 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Fen1P39749 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Fen1P39749 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fen1P39749 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fen1P39749 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Fen1P39749 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.79■□□□□ 0.76
Fen1P39749 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Fen1P39749 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fen1P39749 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.78■□□□□ 0.76
Fen1P39749 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.78■□□□□ 0.76
Fen1P39749 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fen1P39749 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fen1P39749 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fen1P39749 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Fen1P39749 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fen1P39749 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Fen1P39749 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Fen1P39749 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Fen1P39749 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fen1P39749 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Fen1P39749 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Fen1P39749 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Fen1P39749 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Fen1P39749 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Fen1P39749 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Fen1P39749 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fen1P39749 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Fen1P39749 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fen1P39749 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.75■□□□□ 0.75
Fen1P39749 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fen1P39749 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Fen1P39749 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Fen1P39749 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fen1P39749 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Fen1P39749 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fen1P39749 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms