Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Msh3P13705 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.91■■□□□ 1.1
Msh3P13705 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Msh3P13705 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh3P13705 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh3P13705 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh3P13705 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.9■■□□□ 1.1
Msh3P13705 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
Msh3P13705 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Msh3P13705 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh3P13705 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Msh3P13705 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Msh3P13705 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Msh3P13705 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
Msh3P13705 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Msh3P13705 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Msh3P13705 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Msh3P13705 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.88■■□□□ 1.09
Msh3P13705 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.88■■□□□ 1.09
Msh3P13705 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh3P13705 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Msh3P13705 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.88■■□□□ 1.09
Msh3P13705 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Msh3P13705 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Msh3P13705 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh3P13705 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh3P13705 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh3P13705 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh3P13705 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Msh3P13705 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Msh3P13705 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Msh3P13705 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Msh3P13705 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.86■■□□□ 1.09
Msh3P13705 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
Msh3P13705 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.86■■□□□ 1.09
Msh3P13705 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Msh3P13705 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh3P13705 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.85■■□□□ 1.09
Msh3P13705 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.85■■□□□ 1.09
Msh3P13705 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.85■■□□□ 1.09
Msh3P13705 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.85■■□□□ 1.09
Msh3P13705 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Msh3P13705 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Msh3P13705 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh3P13705 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh3P13705 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh3P13705 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.84■■□□□ 1.09
Msh3P13705 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh3P13705 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh3P13705 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh3P13705 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Msh3P13705 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Msh3P13705 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Msh3P13705 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.83■■□□□ 1.09
Msh3P13705 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.83■■□□□ 1.09
Msh3P13705 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Msh3P13705 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Msh3P13705 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 AA386476-201ENSMUST00000098781 1665 ntBASIC21.82■■□□□ 1.08
Msh3P13705 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.82■■□□□ 1.08
Msh3P13705 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 Gm12251-201ENSMUST00000117893 792 ntBASIC21.82■■□□□ 1.08
Msh3P13705 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Msh3P13705 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 Gm43137-201ENSMUST00000198052 594 ntBASIC21.82■■□□□ 1.08
Msh3P13705 Spcs1-204ENSMUST00000226782 949 ntBASIC21.82■■□□□ 1.08
Msh3P13705 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Msh3P13705 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Msh3P13705 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh3P13705 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms