Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04946 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04946 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P04946 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.1■□□□□ 0.33
P04946 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04946 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.1■□□□□ 0.33
P04946 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04946 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
P04946 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.09■□□□□ 0.33
P04946 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P04946 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.09■□□□□ 0.33
P04946 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04946 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P04946 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.08■□□□□ 0.33
P04946 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04946 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04946 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
P04946 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.08■□□□□ 0.32
P04946 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P04946 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04946 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04946 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.07■□□□□ 0.32
P04946 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04946 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.07■□□□□ 0.32
P04946 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.07■□□□□ 0.32
P04946 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.07■□□□□ 0.32
P04946 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04946 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04946 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04946 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P04946 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.06■□□□□ 0.32
P04946 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P04946 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
P04946 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.06■□□□□ 0.32
P04946 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
P04946 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.06■□□□□ 0.32
P04946 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04946 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P04946 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
P04946 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
P04946 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
P04946 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04946 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.04■□□□□ 0.32
P04946 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04946 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P04946 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
P04946 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.03■□□□□ 0.32
P04946 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.03■□□□□ 0.32
P04946 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.03■□□□□ 0.32
P04946 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.03■□□□□ 0.32
P04946 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.03■□□□□ 0.32
P04946 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P04946 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
P04946 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04946 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04946 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04946 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
P04946 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04946 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms