Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.3■□□□□ 0.04
P03980 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
P03980 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P03980 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
P03980 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P03980 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.29■□□□□ 0.04
P03980 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P03980 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P03980 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P03980 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P03980 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P03980 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P03980 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P03980 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P03980 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P03980 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.27■□□□□ 0.04
P03980 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.27■□□□□ 0.04
P03980 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
P03980 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P03980 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.26■□□□□ 0.03
P03980 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P03980 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.26■□□□□ 0.03
P03980 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P03980 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.26■□□□□ 0.03
P03980 Mir6538-201ENSMUST00000183713 110 ntBASIC15.26■□□□□ 0.03
P03980 Gm45444-201ENSMUST00000211394 898 ntBASIC15.26■□□□□ 0.03
P03980 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P03980 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Golph3-205ENSMUST00000228671 2842 ntBASIC15.26■□□□□ 0.03
P03980 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P03980 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P03980 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P03980 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
P03980 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.25■□□□□ 0.03
P03980 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P03980 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.25■□□□□ 0.03
P03980 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P03980 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P03980 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P03980 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P03980 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P03980 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P03980 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P03980 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.24■□□□□ 0.03
P03980 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P03980 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P03980 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P03980 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms