Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CfdP03953 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CfdP03953 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CfdP03953 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CfdP03953 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CfdP03953 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CfdP03953 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.54■□□□□ 0.24
CfdP03953 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CfdP03953 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.53■□□□□ 0.24
CfdP03953 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.53■□□□□ 0.24
CfdP03953 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CfdP03953 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.53■□□□□ 0.24
CfdP03953 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CfdP03953 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CfdP03953 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CfdP03953 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.52■□□□□ 0.24
CfdP03953 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CfdP03953 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CfdP03953 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.52■□□□□ 0.23
CfdP03953 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.51■□□□□ 0.23
CfdP03953 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.51■□□□□ 0.23
CfdP03953 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CfdP03953 Gm7332-201ENSMUST00000118351 454 ntBASIC16.51■□□□□ 0.23
CfdP03953 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.51■□□□□ 0.23
CfdP03953 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CfdP03953 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CfdP03953 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.51■□□□□ 0.23
CfdP03953 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CfdP03953 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CfdP03953 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.5■□□□□ 0.23
CfdP03953 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CfdP03953 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.49■□□□□ 0.23
CfdP03953 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CfdP03953 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CfdP03953 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms