Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Dkk1O54908 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.15■□□□□ 0.34
Dkk1O54908 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Dkk1O54908 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.15■□□□□ 0.34
Dkk1O54908 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Dkk1O54908 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.15■□□□□ 0.34
Dkk1O54908 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Dkk1O54908 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dkk1O54908 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Gm25509-201ENSMUST00000116985 106 ntBASIC17.14■□□□□ 0.33
Dkk1O54908 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Dkk1O54908 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dkk1O54908 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dkk1O54908 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Dkk1O54908 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17.13■□□□□ 0.33
Dkk1O54908 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.13■□□□□ 0.33
Dkk1O54908 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Dkk1O54908 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Dkk1O54908 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dkk1O54908 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Dkk1O54908 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.13■□□□□ 0.33
Dkk1O54908 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Dkk1O54908 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dkk1O54908 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Dkk1O54908 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Dkk1O54908 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.11■□□□□ 0.33
Dkk1O54908 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dkk1O54908 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
Dkk1O54908 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dkk1O54908 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Dkk1O54908 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.1■□□□□ 0.33
Dkk1O54908 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.1■□□□□ 0.33
Dkk1O54908 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Gm27454-201ENSMUST00000185090 204 ntBASIC17.1■□□□□ 0.33
Dkk1O54908 Gm43137-201ENSMUST00000198052 594 ntBASIC17.1■□□□□ 0.33
Dkk1O54908 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.1■□□□□ 0.33
Dkk1O54908 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Dkk1O54908 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
Dkk1O54908 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dkk1O54908 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Dkk1O54908 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.09■□□□□ 0.33
Dkk1O54908 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.09■□□□□ 0.33
Dkk1O54908 Gm12821-201ENSMUST00000120022 600 ntBASIC17.09■□□□□ 0.33
Dkk1O54908 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Dkk1O54908 Gm37965-201ENSMUST00000195304 1362 ntBASIC17.09■□□□□ 0.33
Dkk1O54908 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dkk1O54908 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.09■□□□□ 0.33
Dkk1O54908 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dkk1O54908 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dkk1O54908 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dkk1O54908 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Dkk1O54908 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dkk1O54908 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dkk1O54908 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Dkk1O54908 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dkk1O54908 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dkk1O54908 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
Dkk1O54908 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dkk1O54908 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dkk1O54908 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms