Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.47□□□□□ -0.57
Herc1E9PZP8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Herc1E9PZP8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc1E9PZP8 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.46□□□□□ -0.57
Herc1E9PZP8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc1E9PZP8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc1E9PZP8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Herc1E9PZP8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc1E9PZP8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc1E9PZP8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.44□□□□□ -0.58
Herc1E9PZP8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.44□□□□□ -0.58
Herc1E9PZP8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.44□□□□□ -0.58
Herc1E9PZP8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC11.43□□□□□ -0.58
Herc1E9PZP8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Gm6345-202ENSMUST00000180900 204 ntBASIC11.43□□□□□ -0.58
Herc1E9PZP8 Gm5417-201ENSMUST00000079706 384 ntBASIC11.43□□□□□ -0.58
Herc1E9PZP8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.43□□□□□ -0.58
Herc1E9PZP8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Herc1E9PZP8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Amer2-203ENSMUST00000225247 2662 ntBASIC11.42□□□□□ -0.58
Herc1E9PZP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc1E9PZP8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Gm7063-201ENSMUST00000186840 981 ntBASIC11.41□□□□□ -0.58
Herc1E9PZP8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.41□□□□□ -0.58
Herc1E9PZP8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc1E9PZP8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc1E9PZP8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms