Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Gm5878E9PUB3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Etf1-202ENSMUST00000180351 108 ntBASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Gm5812-201ENSMUST00000061073 957 ntBASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm5878E9PUB3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Gm15820-201ENSMUST00000201566 728 ntBASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm5878E9PUB3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm5878E9PUB3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm5878E9PUB3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm5878E9PUB3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm5878E9PUB3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Gm15546-201ENSMUST00000122095 826 ntBASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm5878E9PUB3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms