Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Gm18671-201ENSMUST00000214826 683 ntBASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d4bA6X942 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d4bA6X942 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d4bA6X942 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.16■□□□□ 0.98
Sh2d4bA6X942 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh2d4bA6X942 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4bA6X942 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sh2d4bA6X942 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh2d4bA6X942 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.14■□□□□ 0.98
Sh2d4bA6X942 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4bA6X942 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4bA6X942 Gm40848-201ENSMUST00000221998 324 ntBASIC21.14■□□□□ 0.97
Sh2d4bA6X942 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4bA6X942 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4bA6X942 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sh2d4bA6X942 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sh2d4bA6X942 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh2d4bA6X942 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Gm43530-201ENSMUST00000195920 274 ntBASIC21.1■□□□□ 0.97
Sh2d4bA6X942 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.1■□□□□ 0.97
Sh2d4bA6X942 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh2d4bA6X942 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh2d4bA6X942 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh2d4bA6X942 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh2d4bA6X942 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh2d4bA6X942 AV356131-201ENSMUST00000206201 750 ntBASIC21.08■□□□□ 0.97
Sh2d4bA6X942 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh2d4bA6X942 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh2d4bA6X942 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d4bA6X942 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Smad6-203ENSMUST00000179458 273 ntBASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Gm10033-202ENSMUST00000211874 928 ntBASIC21.05■□□□□ 0.96
Sh2d4bA6X942 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh2d4bA6X942 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms