Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933424G06RikA0A140LIP3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
4933424G06RikA0A140LIP3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933424G06RikA0A140LIP3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.27■□□□□ 0.84
4933424G06RikA0A140LIP3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
4933424G06RikA0A140LIP3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4933424G06RikA0A140LIP3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933424G06RikA0A140LIP3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.24■□□□□ 0.83
4933424G06RikA0A140LIP3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933424G06RikA0A140LIP3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4933424G06RikA0A140LIP3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
4933424G06RikA0A140LIP3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
4933424G06RikA0A140LIP3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.19■□□□□ 0.82
4933424G06RikA0A140LIP3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
4933424G06RikA0A140LIP3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms