Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7417-201ENSMUST00000192950 473 ntBASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5812-201ENSMUST00000061073 957 ntBASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.33■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms