Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.73■□□□□ 0.11
Trav17A0A075B655 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav17A0A075B655 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav17A0A075B655 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.71■□□□□ 0.11
Trav17A0A075B655 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav17A0A075B655 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav17A0A075B655 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.69■□□□□ 0.1
Trav17A0A075B655 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav17A0A075B655 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Mir6538-201ENSMUST00000183713 110 ntBASIC15.68■□□□□ 0.1
Trav17A0A075B655 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.68■□□□□ 0.1
Trav17A0A075B655 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav17A0A075B655 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav17A0A075B655 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms