Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-4A0A075B631 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav9n-4A0A075B631 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav9n-4A0A075B631 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9n-4A0A075B631 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-4A0A075B631 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Gm40881-201ENSMUST00000223397 166 ntBASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav9n-4A0A075B631 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav9n-4A0A075B631 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-4A0A075B631 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-4A0A075B631 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-4A0A075B631 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav9n-4A0A075B631 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-4A0A075B631 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-4A0A075B631 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-4A0A075B631 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Gm15820-201ENSMUST00000201566 728 ntBASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Gm7143-201ENSMUST00000222811 859 ntBASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-4A0A075B631 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-4A0A075B631 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms