Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cldn13Q9Z0S4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn13Q9Z0S4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Golph3-202ENSMUST00000226517 2359 ntBASIC17.73■□□□□ 0.43
Cldn13Q9Z0S4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn13Q9Z0S4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn13Q9Z0S4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn13Q9Z0S4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.71■□□□□ 0.42
Cldn13Q9Z0S4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Cldn13Q9Z0S4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn13Q9Z0S4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn13Q9Z0S4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.69■□□□□ 0.42
Cldn13Q9Z0S4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.69■□□□□ 0.42
Cldn13Q9Z0S4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn13Q9Z0S4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn13Q9Z0S4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn13Q9Z0S4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn13Q9Z0S4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 196.2 ms