Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Msantd3Q9CR78 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msantd3Q9CR78 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msantd3Q9CR78 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Gm37179-201ENSMUST00000194862 823 ntBASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msantd3Q9CR78 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msantd3Q9CR78 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Mir6236-201ENSMUST00000184437 123 ntBASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msantd3Q9CR78 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msantd3Q9CR78 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Gm10033-202ENSMUST00000211874 928 ntBASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msantd3Q9CR78 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 AV356131-201ENSMUST00000206201 750 ntBASIC19.07■□□□□ 0.64
Msantd3Q9CR78 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.07■□□□□ 0.64
Msantd3Q9CR78 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Gm42778-201ENSMUST00000199644 553 ntBASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.06■□□□□ 0.64
Msantd3Q9CR78 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.06■□□□□ 0.64
Msantd3Q9CR78 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms