Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tmem42Q9CR22 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem42Q9CR22 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Gm9870-201ENSMUST00000063874 645 ntBASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tmem42Q9CR22 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Mir6236-201ENSMUST00000184437 123 ntBASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Gm43530-201ENSMUST00000195920 274 ntBASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem42Q9CR22 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.3■□□□□ 0.36
Tmem42Q9CR22 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem42Q9CR22 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.29■□□□□ 0.36
Tmem42Q9CR22 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem42Q9CR22 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Gm15820-201ENSMUST00000201566 728 ntBASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.28■□□□□ 0.36
Tmem42Q9CR22 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tmem42Q9CR22 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.27■□□□□ 0.35
Tmem42Q9CR22 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tmem42Q9CR22 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Gm5812-201ENSMUST00000061073 957 ntBASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem42Q9CR22 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem42Q9CR22 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tmem42Q9CR22 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem42Q9CR22 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem42Q9CR22 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tmem42Q9CR22 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tmem42Q9CR22 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms