Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scrt1Q99M85 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.42■□□□□ 0.38
Scrt1Q99M85 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.41■□□□□ 0.38
Scrt1Q99M85 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scrt1Q99M85 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Gm10033-202ENSMUST00000211874 928 ntBASIC17.4■□□□□ 0.38
Scrt1Q99M85 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.4■□□□□ 0.38
Scrt1Q99M85 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scrt1Q99M85 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scrt1Q99M85 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 AV356131-201ENSMUST00000206201 750 ntBASIC17.39■□□□□ 0.37
Scrt1Q99M85 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scrt1Q99M85 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scrt1Q99M85 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.37■□□□□ 0.37
Scrt1Q99M85 Smad6-203ENSMUST00000179458 273 ntBASIC17.37■□□□□ 0.37
Scrt1Q99M85 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scrt1Q99M85 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.36■□□□□ 0.37
Scrt1Q99M85 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scrt1Q99M85 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms