Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim60Q8VI40 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim60Q8VI40 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim60Q8VI40 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim60Q8VI40 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.58■□□□□ 0.89
Trim60Q8VI40 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim60Q8VI40 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim60Q8VI40 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim60Q8VI40 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim60Q8VI40 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim60Q8VI40 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim60Q8VI40 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Trim60Q8VI40 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Mir6236-201ENSMUST00000184437 123 ntBASIC20.55■□□□□ 0.88
Trim60Q8VI40 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim60Q8VI40 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim60Q8VI40 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Golph3-202ENSMUST00000226517 2359 ntBASIC20.53■□□□□ 0.88
Trim60Q8VI40 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim60Q8VI40 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim60Q8VI40 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trim60Q8VI40 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim60Q8VI40 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim60Q8VI40 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trim60Q8VI40 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms