Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Upb1Q8VC97 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.71■■□□□ 1.07
Upb1Q8VC97 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Upb1Q8VC97 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Gm43060-201ENSMUST00000200621 289 ntBASIC21.7■■□□□ 1.06
Upb1Q8VC97 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
Upb1Q8VC97 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Upb1Q8VC97 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Upb1Q8VC97 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Upb1Q8VC97 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Upb1Q8VC97 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Gm40848-201ENSMUST00000221998 324 ntBASIC21.67■■□□□ 1.06
Upb1Q8VC97 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Upb1Q8VC97 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upb1Q8VC97 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Gm11421-201ENSMUST00000122124 294 ntBASIC21.65■■□□□ 1.06
Upb1Q8VC97 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upb1Q8VC97 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Upb1Q8VC97 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Gm18284-201ENSMUST00000172604 624 ntBASIC21.64■■□□□ 1.05
Upb1Q8VC97 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upb1Q8VC97 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upb1Q8VC97 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upb1Q8VC97 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.61■■□□□ 1.05
Upb1Q8VC97 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms