Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Q8CDN1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.6■□□□□ 0.89
Q8CDN1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8CDN1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.6■□□□□ 0.89
Q8CDN1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8CDN1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8CDN1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Q8CDN1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Q8CDN1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.58■□□□□ 0.89
Q8CDN1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.58■□□□□ 0.89
Q8CDN1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q8CDN1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q8CDN1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q8CDN1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Q8CDN1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.57■□□□□ 0.88
Q8CDN1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8CDN1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Q8CDN1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.56■□□□□ 0.88
Q8CDN1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Q8CDN1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q8CDN1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Q8CDN1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Q8CDN1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Q8CDN1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.55■□□□□ 0.88
Q8CDN1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.55■□□□□ 0.88
Q8CDN1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8CDN1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.54■□□□□ 0.88
Q8CDN1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Q8CDN1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Q8CDN1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8CDN1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.53■□□□□ 0.88
Q8CDN1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8CDN1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Q8CDN1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Q8CDN1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Q8CDN1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
Q8CDN1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Q8CDN1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8CDN1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.52■□□□□ 0.87
Q8CDN1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Q8CDN1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.51■□□□□ 0.87
Q8CDN1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8CDN1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8CDN1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.51■□□□□ 0.87
Q8CDN1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Q8CDN1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8CDN1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8CDN1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.51■□□□□ 0.87
Q8CDN1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms