Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lrif1Q8CDD9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lrif1Q8CDD9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lrif1Q8CDD9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lrif1Q8CDD9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.64■□□□□ 0.74
Lrif1Q8CDD9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrif1Q8CDD9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Lrif1Q8CDD9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrif1Q8CDD9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrif1Q8CDD9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrif1Q8CDD9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrif1Q8CDD9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrif1Q8CDD9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.58■□□□□ 0.73
Lrif1Q8CDD9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lrif1Q8CDD9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrif1Q8CDD9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrif1Q8CDD9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrif1Q8CDD9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Lrif1Q8CDD9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.57■□□□□ 0.72
Lrif1Q8CDD9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Lrif1Q8CDD9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrif1Q8CDD9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms