Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd4Q8CC84 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd4Q8CC84 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd4Q8CC84 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lysmd4Q8CC84 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lysmd4Q8CC84 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lysmd4Q8CC84 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lysmd4Q8CC84 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lysmd4Q8CC84 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lysmd4Q8CC84 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lysmd4Q8CC84 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lysmd4Q8CC84 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lysmd4Q8CC84 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd4Q8CC84 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd4Q8CC84 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.83■□□□□ 0.44
Lysmd4Q8CC84 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd4Q8CC84 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.83■□□□□ 0.44
Lysmd4Q8CC84 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd4Q8CC84 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Lysmd4Q8CC84 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd4Q8CC84 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd4Q8CC84 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd4Q8CC84 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lysmd4Q8CC84 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd4Q8CC84 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms