Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sh3rf3Q8C120 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Sh3rf3Q8C120 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Sh3rf3Q8C120 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.76■□□□□ 0.91
Sh3rf3Q8C120 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf3Q8C120 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.74■□□□□ 0.91
Sh3rf3Q8C120 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf3Q8C120 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Sh3rf3Q8C120 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Golgb1-201ENSMUST00000023534 498 ntBASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf3Q8C120 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sh3rf3Q8C120 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Sh3rf3Q8C120 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3rf3Q8C120 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3rf3Q8C120 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms