Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.19■□□□□ 0.5
Zc3hc1Q80YV2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3hc1Q80YV2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3hc1Q80YV2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3hc1Q80YV2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3hc1Q80YV2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.17■□□□□ 0.5
Zc3hc1Q80YV2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3hc1Q80YV2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3hc1Q80YV2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zc3hc1Q80YV2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Zc3hc1Q80YV2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zc3hc1Q80YV2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zc3hc1Q80YV2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3hc1Q80YV2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Gm10399-202ENSMUST00000202768 748 ntBASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3hc1Q80YV2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3hc1Q80YV2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3hc1Q80YV2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3hc1Q80YV2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3hc1Q80YV2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms