Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx6Q6P8X1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.98■□□□□ 0.63
Snx6Q6P8X1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.98■□□□□ 0.63
Snx6Q6P8X1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx6Q6P8X1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx6Q6P8X1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Snx6Q6P8X1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx6Q6P8X1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.94■□□□□ 0.62
Snx6Q6P8X1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx6Q6P8X1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx6Q6P8X1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.92■□□□□ 0.62
Snx6Q6P8X1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx6Q6P8X1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Snx6Q6P8X1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Snx6Q6P8X1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx6Q6P8X1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx6Q6P8X1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms