Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Gm18284-201ENSMUST00000172604 624 ntBASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl3Q6P1Y1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl3Q6P1Y1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl3Q6P1Y1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Mir7075-201ENSMUST00000184187 82 ntBASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rtl3Q6P1Y1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rtl3Q6P1Y1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl3Q6P1Y1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Gm12251-201ENSMUST00000117893 792 ntBASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl3Q6P1Y1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl3Q6P1Y1 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.49■□□□□ 0.87
Rtl3Q6P1Y1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl3Q6P1Y1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl3Q6P1Y1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms