Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Clns1aQ61189 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.98■□□□□ 0.31
Clns1aQ61189 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Clns1aQ61189 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clns1aQ61189 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Clns1aQ61189 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clns1aQ61189 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clns1aQ61189 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clns1aQ61189 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clns1aQ61189 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clns1aQ61189 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clns1aQ61189 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clns1aQ61189 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clns1aQ61189 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clns1aQ61189 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.95■□□□□ 0.3
Clns1aQ61189 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.95■□□□□ 0.3
Clns1aQ61189 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.95■□□□□ 0.3
Clns1aQ61189 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clns1aQ61189 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clns1aQ61189 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clns1aQ61189 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clns1aQ61189 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clns1aQ61189 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clns1aQ61189 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.94■□□□□ 0.3
Clns1aQ61189 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Clns1aQ61189 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clns1aQ61189 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clns1aQ61189 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.93■□□□□ 0.3
Clns1aQ61189 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clns1aQ61189 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Clns1aQ61189 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clns1aQ61189 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clns1aQ61189 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.92■□□□□ 0.3
Clns1aQ61189 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clns1aQ61189 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clns1aQ61189 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clns1aQ61189 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clns1aQ61189 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clns1aQ61189 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clns1aQ61189 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.92■□□□□ 0.3
Clns1aQ61189 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clns1aQ61189 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.92■□□□□ 0.3
Clns1aQ61189 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Clns1aQ61189 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.91■□□□□ 0.3
Clns1aQ61189 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.91■□□□□ 0.3
Clns1aQ61189 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.91■□□□□ 0.3
Clns1aQ61189 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Clns1aQ61189 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clns1aQ61189 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clns1aQ61189 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Clns1aQ61189 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms