Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Smad6-203ENSMUST00000179458 273 ntBASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Gm10493-201ENSMUST00000097270 612 ntBASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Shroom1Q5SX79 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shroom1Q5SX79 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Notumos-201ENSMUST00000151998 2659 ntBASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shroom1Q5SX79 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shroom1Q5SX79 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Shroom1Q5SX79 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
Shroom1Q5SX79 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Shroom1Q5SX79 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.14■□□□□ 0.97
Shroom1Q5SX79 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Shroom1Q5SX79 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Shroom1Q5SX79 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shroom1Q5SX79 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shroom1Q5SX79 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms