Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.58■■□□□ 1.05
R3hdm4Q4VBF2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3hdm4Q4VBF2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3hdm4Q4VBF2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.57■■□□□ 1.04
R3hdm4Q4VBF2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm4Q4VBF2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm4Q4VBF2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
R3hdm4Q4VBF2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm4Q4VBF2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm4Q4VBF2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm4Q4VBF2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm4Q4VBF2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Mir7075-201ENSMUST00000184187 82 ntBASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm4Q4VBF2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm4Q4VBF2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm4Q4VBF2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Spcs1-204ENSMUST00000226782 949 ntBASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm4Q4VBF2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm4Q4VBF2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Gm6139-201ENSMUST00000079261 882 ntBASIC21.48■■□□□ 1.03
R3hdm4Q4VBF2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms